| EST name | EST sequence |
| gi|30102224|gb|CB895055.1|CB895055 | GACTTGAAATAGTTTGGGGAAGTGGAACAGTTGAGTGTTGACCTGACATTGACTACATTCTTTCTTCTTCCTCAAAATCT CTCTGTCATCGTCATCGTCATCGTCATCGTCATCGTCATCATCATCATCGGAAAGTAAAAATAAGTTAGCACTGAACATG GGTAAAAGTAAAACAATTGAGTTGTATGGATTCCCTTCTTTTGTGAACGTGTCTCAAGTAAAGATATTTGTAGAGCATTA TACCGGTGAAGGAAGTGTGGTTGCTATGAAGATTAGAGTAGGCAATGGCCGGGTTAAAAGAGCATTTGCAATTATTCAGT TCACTACTGCAAAACATGCTACATTCATGATGGCCTTACCTAGCAGAACAAAATTGCGGTTCGGAGACTCCTATTTAAAA GTTAGGGAATTGGAAAGAGATATTGATCCAAAGCCAAGGGCATTCTTGGACAGTTTAGACGATGTTAAACTGTATTTTGG CTGTCAGATCTCAAAGGAAAGATTCTCTAAATTATGGAAGGTGGATGCTAGTGTAGATTTTGGGATTGGTATGAGAAAGT GGCGATTCTCTATGCACCATGAAAATAAGAAGTTCAAACTTGAGCTTTCGTATGAGAATATTTGGAAGATTGAGCTGCAT CAACCACAGGGTAAAACTGCAAAGTATCTATTGATTTAGG |
Most similar to sp|Q9LQV2|RDR1_ARATH
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9LQV2|RDR1_ARATH RNA-dependent RNA polymerase 1 OS=Arabidopsis
thaliana GN=RDR1 PE=2 SV=1
Length = 1107
Score = 165 bits (418), Expect = 2e-40
Identities = 81/170 (47%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Frame = +2
Query: 170 KTIELYGFPSFVNVSQVKIFVEHYTGEGSVVAMKIRVGNGRVKRAFAIIQFTTAKHATFM 349
KTI+++GFP+ V+ +VK F+E TG G+V A+K+R R +AI+QFT+ +H T +
Sbjct: 3 KTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERH-TRL 61
Query: 350 MALPSRTKLRFGDSYLKVRELERDIDPKPRAFLDSLDDVKLYFGCQISKERFSKLWKV-D 526
+ + +L +G SYLK E+E+DI PKPRA L ++ +K++FGCQ+S ++F LW D
Sbjct: 62 IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQD 121
Query: 527 ASVDFGIGMRKWRFSMHHENKKFKLELSYENIWKIELHQPQGKTAKYLLI 676
V FGIGMRK FS K ++LELSYENIW+I+LH PQG+++K+L+I
Sbjct: 122 VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVI 171